STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DrgA_1Nitroreductase. (236 aa)    
Predicted Functional Partners:
RMCT_0267
Polyketide cyclase / dehydrase and lipid transport.
       0.546
PpsA_2
Beta-ketoacyl synthase.
  
 
 0.546
Fgd1_4
5,10-methylenetetrahydromethanopterin reductase.
 
  
 0.532
CadI_2
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.524
CadI_1
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.524
RMCT_3153
Antibiotic ABC transporter membrane protein.
  
  
 0.491
DrgA_2
Oxidoreductase.
  
     0.466
tadA
Cytidine/deoxycytidylate deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
  
 0.465
GuaD
Cytosine/adenosine deaminase.
  
  
 0.465
RMCT_4076
Lactoylglutathione lyase-like lyase.
  
  
 0.462
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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