Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_0279Type I phosphodiesterase/nucleotide pyrophosphatase. (378 aa)    
Predicted Functional Partners:
RMCT_0281
Putative uncharacterized protein; Belongs to the UPF0246 family.
 
     0.782
RMCT_0280
Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins.
       0.769
RMCT_0278
Putative uncharacterized protein.
     
 0.701
RMCT_1789
Pyridoxamine 5'-phosphate oxidase-like protein.
 
     0.497
RMCT_0277
Putative uncharacterized protein.
       0.475
atpE
F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
    
 0.473
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
 
 
  0.469
RMCT_0930
Major facilitator superfamily permease.
  
    0.463
MsbA
ABC transporter.
 
 
 0.439
RMCT_0090
Putative uncharacterized protein.
 
   
 0.435
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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