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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PknH_4Transmembrane serine/threonine-protein kinase. (234 aa)    
Predicted Functional Partners:
PstP
Serine/threonine phosphatase ppp.
  
 
 0.622
RMCT_0284
Putative uncharacterized protein.
  
  
 0.606
RMCT_4559
Stage II sporulation protein E.
  
 
 0.560
UbiF_1
FAD-dependent oxidoreductase.
       0.505
ArtM_2
ABC transporter ATP-binding protein.
  
 
 0.475
FtsE_2
Transmembrane ATP-binding protein ABC transporter.
  
 
 0.475
LptB_1
ABC transporter ATP-binding protein.
  
 
 0.475
RMCT_0377
FHA domain-containing protein.
   
 
 0.439
RMCT_1094
FHA domain-containing protein.
   
 
 0.437
RMCT_1095
FHA domain-containing protein.
   
 
 0.427
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.