Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
RMCT_0299XRE family transcriptional regulator. (279 aa)    
Predicted Functional Partners:
RMCT_0300
Putative uncharacterized protein.
       0.661
LutR
GntR family transcriptional regulator.
  
  
 0.632
TetC
TetR family transcriptional regulator.
  
   
 0.611
RMCT_4098
Putative uncharacterized protein.
  
     0.566
RMCT_0298
Membrane protein.
       0.563
RMCT_0302
Fatty acid hydroxylase.
       0.556
RMCT_3723
Indolepyruvate ferredoxin oxidoreductase alpha and subunit beta.
 
  
 0.481
RMCT_1552
ECF subfamily RNA polymerase sigma-24 factor; Belongs to the sigma-70 factor family.
 
  
 0.443
YtnP_2
Zn-dependent hydrolase, including glyoxylase.
 
    0.439
YybR
HxlR family transcriptional regulator.
  
  
 0.435
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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