Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_0302Fatty acid hydroxylase. (216 aa)    
Predicted Functional Partners:
LutR
GntR family transcriptional regulator.
 
     0.950
BcrC
Sphingosine/diacylglycerol kinase-like enzyme.
 
 
 
 0.799
idi
Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
  
  
 0.646
RMCT_0300
Putative uncharacterized protein.
       0.618
RMCT_4559
Stage II sporulation protein E.
  
 
 0.598
CrtM
Phytoene synthase.
  
 
 0.592
UbiF_1
FAD-dependent oxidoreductase.
   
 
 0.588
TfdB
Aromatic ring hydroxylase.
   
 
 0.588
RMCT_1612
Putative uncharacterized protein.
   
 
 0.588
RMCT_1982
Putative uncharacterized protein.
   
 
 0.588
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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