Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Bfr | BfrB | RMCT_0317 | RMCT_3490 | Bacterioferritin bfrA; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Possible bacterioferritin BfrB; Iron-storage protein. | 0.981 |
| Bfr | Bmr3_1 | RMCT_0317 | RMCT_2426 | Bacterioferritin bfrA; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Major facilitator transporter. | 0.540 |
| Bfr | Cph1 | RMCT_0317 | RMCT_0204 | Bacterioferritin bfrA; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Two-component system sensor kinase. | 0.667 |
| Bfr | Dps | RMCT_0317 | RMCT_1231 | Bacterioferritin bfrA; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Ferritin, Dps family protein; Belongs to the Dps family. | 0.658 |
| Bfr | IdeR_2 | RMCT_0317 | RMCT_0698 | Bacterioferritin bfrA; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Iron-dependent repressor and activator ideR. | 0.613 |
| Bfr | RMCT_0316 | RMCT_0317 | RMCT_0316 | Bacterioferritin bfrA; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Carboxymuconolactone decarboxylase. | 0.809 |
| Bfr | RMCT_4559 | RMCT_0317 | RMCT_4559 | Bacterioferritin bfrA; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Stage II sporulation protein E. | 0.799 |
| Bfr | dnaK | RMCT_0317 | RMCT_4023 | Bacterioferritin bfrA; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.563 |
| Bfr | groES | RMCT_0317 | RMCT_0565 | Bacterioferritin bfrA; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.565 |
| Bfr | hemH | RMCT_0317 | RMCT_4363 | Bacterioferritin bfrA; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.919 |
| BfrB | Bfr | RMCT_3490 | RMCT_0317 | Possible bacterioferritin BfrB; Iron-storage protein. | Bacterioferritin bfrA; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.981 |
| BfrB | Dps | RMCT_3490 | RMCT_1231 | Possible bacterioferritin BfrB; Iron-storage protein. | Ferritin, Dps family protein; Belongs to the Dps family. | 0.457 |
| BfrB | IdeR_2 | RMCT_3490 | RMCT_0698 | Possible bacterioferritin BfrB; Iron-storage protein. | Iron-dependent repressor and activator ideR. | 0.609 |
| BfrB | dnaK | RMCT_3490 | RMCT_4023 | Possible bacterioferritin BfrB; Iron-storage protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.549 |
| BfrB | groES | RMCT_3490 | RMCT_0565 | Possible bacterioferritin BfrB; Iron-storage protein. | Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.498 |
| BfrB | hemH | RMCT_3490 | RMCT_4363 | Possible bacterioferritin BfrB; Iron-storage protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.916 |
| Bmr3_1 | Bfr | RMCT_2426 | RMCT_0317 | Major facilitator transporter. | Bacterioferritin bfrA; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.540 |
| Bmr3_1 | RMCT_0316 | RMCT_2426 | RMCT_0316 | Major facilitator transporter. | Carboxymuconolactone decarboxylase. | 0.508 |
| Cph1 | Bfr | RMCT_0204 | RMCT_0317 | Two-component system sensor kinase. | Bacterioferritin bfrA; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.667 |
| Cph1 | RMCT_4559 | RMCT_0204 | RMCT_4559 | Two-component system sensor kinase. | Stage II sporulation protein E. | 0.986 |
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