STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0319Putative uncharacterized protein. (356 aa)    
Predicted Functional Partners:
RMCT_0320
Putative uncharacterized protein.
 
  
 0.918
FadE2_1
acyl-CoA dehydrogenase.
 
   0.833
BbsG_1
acyl-CoA dehydrogenase fadE2.
 
   0.832
BbsG_9
acyl-CoA dehydrogenase domain-containing protein.
 
   0.823
BbsG_2
acyl-CoA dehydrogenase domain-containing protein.
 
   0.823
BbsG_7
acyl-CoA dehydrogenase.
 
   0.822
BbsG_3
acyl-CoA dehydrogenase domain-containing protein.
 
   0.817
RMCT_4687
Putative uncharacterized protein.
  
     0.711
RMCT_0321
TetR family transcriptional regulator.
     
 0.620
RMCT_2433
Hypothetical protein.
 
  
 0.575
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.