STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fgd_3Oxidoreductase. (309 aa)    
Predicted Functional Partners:
PolS_3
Short chain dehydrogenase.
       0.779
CofD
LPPG:FO 2-phospho-L-lactate transferase.
 
   
 0.707
Ddn_2
aclJ protein.
 
   
 0.697
Ddn_1
Deazaflavin-dependent nitroreductase family protein.
 
   
 0.695
Ndh
NADH dehydrogenase, FAD-containing subunit.
       0.690
Ddn_3
Deazaflavin-dependent nitroreductase family protein.
  
     0.662
LuxA_1
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase.
  
     0.655
RMCT_4399
Hypothetical protein.
 
   
 0.649
RMCT_2213
F420-dependent oxidoreductase, MSMEG_4879 family.
  
     0.644
RMCT_2287
F420-0--gamma-glutamyl ligase.
 
  
 0.625
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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