STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0352Urease accessory protein UreH. (208 aa)    
Predicted Functional Partners:
RMCT_0354
Urease accessory protein ureF.
 
 
 0.997
ureB
Urease subunit beta; Belongs to the urease beta subunit family.
  
 
 0.987
ureA
Urease subunit gamma; Belongs to the urease gamma subunit family.
  
 
 0.986
ureC
Urease subunit alpha.
  
 
 0.964
ureG
Urease accessory protein ureG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
 
 0.961
GerE
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
     0.694
IniA
Isoniazid inductible gene protein iniA.
 
     0.672
GltB
Ferredoxin-dependent glutamate synthase, large subunit gltB.
      
 0.661
RMCT_4030
Isoniazid inductible gene protein iniC.
  
     0.647
EspG1_1
ESX-1 secretion-associated protein EspG1.
  
     0.637
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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