Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ureBUrease subunit beta; Belongs to the urease beta subunit family. (118 aa)    
Predicted Functional Partners:
ureC
Urease subunit alpha.
 0.999
ureA
Urease subunit gamma; Belongs to the urease gamma subunit family.
 0.999
ureG
Urease accessory protein ureG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
  
 0.990
RMCT_0352
Urease accessory protein UreH.
  
 
 0.987
RMCT_0354
Urease accessory protein ureF.
 
 
 0.981
AccA1_1
Urea amidolyase.
    
 0.931
GatA_2
Allophanate hydrolase.
    
 0.907
RMCT_0358
Thioesterase superfamily protein.
       0.736
GltB
Ferredoxin-dependent glutamate synthase, large subunit gltB.
      
 0.561
ybeY
Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
      
 0.480
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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