STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FbpC_1iron(III) ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (395 aa)    
Predicted Functional Partners:
CysW_1
ABC-type Fe3+ transporter, permease.
 
 
 0.995
FbpA_1
ABC transporter ferric iron-binding periplasmic protein.
 
 
 0.993
YheH
ABC transporter.
  
0.795
ModB
Molbdenum-transport integral membrane protein ABC transporter modB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.739
GltK
Amine acid ABC transporter permease.
  
 
 0.526
TcyB
Amino acid ABC transporter.
  
 
 0.525
CysW_2
Sulfate-transport integral membrane protein ABC transporter cysW.
  
 0.509
CysW_3
Sulfate-transport integral membrane protein ABC transporter cysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.
   
 0.498
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
 
 
 0.482
argS
arginyl-tRNA synthetase.
  
  
 0.469
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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