Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RMCT_0377FHA domain-containing protein. (159 aa)    
Predicted Functional Partners:
Kgd
Alpha-ketoglutarate decarboxylase.
   
 
 0.989
PknB_1
Transmembrane serine/threonine-protein kinase B pknB.
 
 
 
 0.988
PknG
Serine/threonine-protein kinase pknG.
 
 
 
 0.973
PknB_2
Transmembrane serine/threonine-protein kinase A pknA.
 
 
 
 0.963
GdhB_2
NAD-dependent glutamate dehydrogenase gdh.
    
 
 0.961
RMCT_0376
MerR family transcriptional regulator.
 
  
 0.909
PrkC
Transmembrane serine/threonine-protein kinase L pknL.
 
 
 
 0.899
RMCT_1529
Putative uncharacterized protein.
   
 
 0.819
PknH_3
Serine/threonine protein kinase.
 
 
 
 0.770
PknH_1
Extracellular solute-binding protein family 3.
 
 
 
 0.754
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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