STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0377FHA domain-containing protein. (159 aa)    
Predicted Functional Partners:
PknB_1
Transmembrane serine/threonine-protein kinase B pknB.
 
 
 
 0.998
PknG
Serine/threonine-protein kinase pknG.
 
 
 
 0.996
Kgd
Alpha-ketoglutarate decarboxylase.
   
 
 0.996
PknB_2
Transmembrane serine/threonine-protein kinase A pknA.
 
 
 
 0.986
GdhB_2
NAD-dependent glutamate dehydrogenase gdh.
    
 
 0.982
PrkC
Transmembrane serine/threonine-protein kinase L pknL.
 
 
 
 0.930
RMCT_0376
MerR family transcriptional regulator.
 
  
 0.922
RMCT_1529
Putative uncharacterized protein.
   
 
 0.887
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
     
 0.818
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
     
 0.813
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.