Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0381Hypothetical protein. (314 aa)    
Predicted Functional Partners:
RMCT_0380
Integral membrane protein.
 
  
 0.975
RMCT_0379
Hypothetical protein.
 
   
 0.929
PgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.
     
 0.875
secA
Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
       0.865
gcvH
Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
       0.715
RluA
Pseudouridine synthase.
  
    0.603
RMCT_0375
Hypothetical protein.
     
 0.556
PgsA3
Phosphatidylglycerophosphate synthase pgsA3; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.555
YddA
ABC-type uncharacterized transport system, permease and ATPase component.
       0.548
RMCT_3692
Protein of unknown function.
      
 0.541
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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