Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
YddAABC-type uncharacterized transport system, permease and ATPase component. (638 aa)    
Predicted Functional Partners:
FtsH3
ATPase; Belongs to the AAA ATPase family.
  
 
 0.604
secA
Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
       0.564
PgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.
       0.551
RMCT_0381
Hypothetical protein.
       0.548
FtsH2
ATPase central domain-containing protein; Belongs to the AAA ATPase family.
    
 0.540
RMCT_0549
Carotenoid oxygenase.
  
 
  0.540
EccA1_1
Type VII secretion AAA-ATPase EccA.
    
 0.540
RMCT_2459
Carotenoid cleavage dioxygenase.
  
 
  0.540
EccA1_2
ATPase central domain-containing protein.
    
 0.540
RMCT_4533
Putative uncharacterized protein.
 
 
 0.533
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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