STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OphA1_1Ferredoxin. (368 aa)    
Predicted Functional Partners:
RMCT_0396
Metal-dependent hydrolase.
     0.891
NifU
Nitrogen fixation-like protein.
  
 0.837
IscS
Cysteine desulfurase iscS.
  
 0.826
FprB
ferredoxin/ferredoxin--NADP reductase.
   
 0.764
FprA_1
4Fe-4S ferredoxin.
   
 0.764
RMCT_4646
Putative uncharacterized protein; Belongs to the cytochrome P450 family.
 
 0.763
PpsA_2
Beta-ketoacyl synthase.
  
 
 0.757
NarB
Sulfite reductase (NADPH) subunit alpha.
 
 
 0.748
BioI_2
Cytochrome P450 superfamily protein.
 
 0.737
Cyp123
Cytochrome P450.
 
 0.729
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.