STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ProVOsmoprotectant transport system ATP-binding protein. (393 aa)    
Predicted Functional Partners:
OpuCC
Glycine betaine/carnitine/choline-binding protein OpuCC.
 
 0.998
YehW_2
Putative ABC transporter, permease protein.
 0.998
YehW_1
ABC quaternary amine transporter, permease component.
 0.998
RMCT_2821
Glycine betaine ABC transporter substrate-binding protein.
  
 
 0.869
MsbA
ABC transporter.
     
0.769
DrrA_3
ABC transporter ATP-binding protein.
    
0.693
RMCT_0415
Putative uncharacterized protein.
       0.605
RMCT_0030
Uncharacterized integral membrane protein.
  
    0.540
RMCT_0031
Hypothetical protein.
       0.508
RMCT_1389
Drug ABC transporter ATP-binding protein.
     
0.478
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.