Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BdhA_2 | CpnA_4 | RMCT_0473 | RMCT_0879 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short-chain alcohol dehydrogenase-like protein. | 0.468 |
BdhA_2 | FabG_11 | RMCT_0473 | RMCT_3398 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein. | 0.475 |
BdhA_2 | FabG_14 | RMCT_0473 | RMCT_0855 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Glucose 1-dehydrogenase. | 0.796 |
BdhA_2 | FabG_25 | RMCT_0473 | RMCT_1644 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Dehydrogenase. | 0.476 |
BdhA_2 | FabG_9 | RMCT_0473 | RMCT_0478 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.816 |
BdhA_2 | HdhA_2 | RMCT_0473 | RMCT_1901 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short chain dehydrogenase. | 0.781 |
BdhA_2 | HsdA_5 | RMCT_0473 | RMCT_2232 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 3-alpha-hydroxysteroid dehydrogenase. | 0.743 |
BdhA_2 | Lvr_1 | RMCT_0473 | RMCT_0451 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.488 |
BdhA_2 | Lvr_5 | RMCT_0473 | RMCT_1335 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.471 |
BdhA_2 | YcdF_2 | RMCT_0473 | RMCT_1618 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Dehydrogenase. | 0.762 |
CpnA_4 | BdhA_2 | RMCT_0879 | RMCT_0473 | Short-chain alcohol dehydrogenase-like protein. | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.468 |
CpnA_4 | FabG_9 | RMCT_0879 | RMCT_0478 | Short-chain alcohol dehydrogenase-like protein. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.709 |
FabG_11 | BdhA_2 | RMCT_3398 | RMCT_0473 | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein. | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.475 |
FabG_11 | FabG_9 | RMCT_3398 | RMCT_0478 | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.725 |
FabG_11 | HsdA_5 | RMCT_3398 | RMCT_2232 | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein. | 3-alpha-hydroxysteroid dehydrogenase. | 0.631 |
FabG_14 | BdhA_2 | RMCT_0855 | RMCT_0473 | Glucose 1-dehydrogenase. | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.796 |
FabG_14 | FabG_9 | RMCT_0855 | RMCT_0478 | Glucose 1-dehydrogenase. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.754 |
FabG_14 | HsdA_5 | RMCT_0855 | RMCT_2232 | Glucose 1-dehydrogenase. | 3-alpha-hydroxysteroid dehydrogenase. | 0.692 |
FabG_25 | BdhA_2 | RMCT_1644 | RMCT_0473 | Dehydrogenase. | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.476 |
FabG_25 | FabG_9 | RMCT_1644 | RMCT_0478 | Dehydrogenase. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.732 |
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