Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_0481NADH:flavin oxidoreductase. (412 aa)    
Predicted Functional Partners:
RMCT_0479
Stress responsive alpha-beta barrel.
       0.567
RMCT_0480
Superfamily II DNA helicase.
       0.567
RMCT_3339
Transcription factor.
  
    0.510
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
  
 0.488
RpsA
30S ribosomal protein S1.
  
  
 0.482
FbpC_5
Esterase.
  
  
 0.480
MdlB
L-lactate dehydrogenase (cytochrome) lldD2.
  
  
 0.479
LldD
L-lactate dehydrogenase (cytochrome) lldD1.
  
  
 0.479
RMCT_4229
Lactate 2-monooxygenase.
  
  
 0.479
CspA
Cold shock protein A cspA.
  
  
 0.478
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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