STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PamO_1Cyclohexanone monooxygenase. (525 aa)    
Predicted Functional Partners:
HsaA_1
Hydroxylase.
 
 
 0.601
RMCT_1278
Epocide hydrolase domain-containing protein.
 
 
 0.579
Hmp_2
3-ketosteroid 9alpha-hydroxylase component KshB.
     
 0.571
Lip2_5
Alpha/beta hydrolase fold-3.
 
  
 0.569
RMCT_1400
Alpha/beta hydrolase.
 
 
 0.470
RMCT_4197
Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase.
 
 
 0.460
BphC
Extradiol dioxygenase, type I.
       0.456
YbhB
Phosphatidylethanolamine-binding protein.
  
 
 0.436
CzcD
Cation diffusion facilitator family transporter.
  
    0.433
atpD
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
 
 0.433
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.