STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PamO_1Cyclohexanone monooxygenase. (525 aa)    
Predicted Functional Partners:
HsaA_1
Hydroxylase.
 
 
 0.589
RMCT_1278
Epocide hydrolase domain-containing protein.
 
 
 0.565
Hmp_2
3-ketosteroid 9alpha-hydroxylase component KshB.
     
 0.563
Lip2_5
Alpha/beta hydrolase fold-3.
 
  
 0.553
CzcD
Cation diffusion facilitator family transporter.
  
  
 0.465
RMCT_1400
Alpha/beta hydrolase.
 
 
 0.463
BphC
Extradiol dioxygenase, type I.
       0.449
RMCT_4197
Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase.
 
 
 0.437
RMCT_0620
Alpha/beta hydrolase.
 
 
 0.417
atpG
F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.415
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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