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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SppAProtease IV sppA. (605 aa)    
Predicted Functional Partners:
RMCT_1507
Ribonucleotide-diphosphate reductase subunit beta.
  
   
 0.623
RMCT_0505
Putative uncharacterized protein.
       0.593
RMCT_0504
Putative uncharacterized protein.
       0.572
RMCT_0634
RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family.
  
  
 0.522
RMCT_2646
Protein of unknown function.
 
  
 0.455
PlsC_1
1-acylglycerol-3-phosphate O-acyltransferase.
  
  
 0.452
RMCT_2689
Membrane flanked domain-containing protein.
  
    0.445
RMCT_2276
Transmembrane protein.
  
    0.441
RMCT_2688
Transmembrane protein.
  
    0.441
RMCT_1405
Transmembrane protein of unknown function.
      
 0.437
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.