Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EthR_1 | MsrR_3 | RMCT_0424 | RMCT_3491 | Transcriptional regulator. | Transcriptional regulator. | 0.806 |
EthR_1 | RMCT_0513 | RMCT_0424 | RMCT_0513 | Transcriptional regulator. | Transcriptional regulator. | 0.727 |
EthR_1 | RMCT_2435 | RMCT_0424 | RMCT_2435 | Transcriptional regulator. | TetR family transcriptional regulator. | 0.847 |
EthR_1 | RMCT_3136 | RMCT_0424 | RMCT_3136 | Transcriptional regulator. | Transcriptional regulatory protein. | 0.768 |
EthR_1 | RMCT_3156 | RMCT_0424 | RMCT_3156 | Transcriptional regulator. | Transcriptional regulator. | 0.722 |
EthR_1 | YybR | RMCT_0424 | RMCT_1981 | Transcriptional regulator. | HxlR family transcriptional regulator. | 0.470 |
EthR_1 | cobB-2 | RMCT_0424 | RMCT_3085 | Transcriptional regulator. | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | 0.823 |
MsrR_3 | EthR_1 | RMCT_3491 | RMCT_0424 | Transcriptional regulator. | Transcriptional regulator. | 0.806 |
MsrR_3 | RMCT_0513 | RMCT_3491 | RMCT_0513 | Transcriptional regulator. | Transcriptional regulator. | 0.749 |
MsrR_3 | RMCT_2435 | RMCT_3491 | RMCT_2435 | Transcriptional regulator. | TetR family transcriptional regulator. | 0.806 |
MsrR_3 | RMCT_3136 | RMCT_3491 | RMCT_3136 | Transcriptional regulator. | Transcriptional regulatory protein. | 0.699 |
MsrR_3 | RMCT_3156 | RMCT_3491 | RMCT_3156 | Transcriptional regulator. | Transcriptional regulator. | 0.767 |
MsrR_3 | YybR | RMCT_3491 | RMCT_1981 | Transcriptional regulator. | HxlR family transcriptional regulator. | 0.720 |
MsrR_3 | cobB-2 | RMCT_3491 | RMCT_3085 | Transcriptional regulator. | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | 0.815 |
RMCT_0513 | EthR_1 | RMCT_0513 | RMCT_0424 | Transcriptional regulator. | Transcriptional regulator. | 0.727 |
RMCT_0513 | MsrR_3 | RMCT_0513 | RMCT_3491 | Transcriptional regulator. | Transcriptional regulator. | 0.749 |
RMCT_0513 | RMCT_2435 | RMCT_0513 | RMCT_2435 | Transcriptional regulator. | TetR family transcriptional regulator. | 0.733 |
RMCT_0513 | RMCT_3136 | RMCT_0513 | RMCT_3136 | Transcriptional regulator. | Transcriptional regulatory protein. | 0.816 |
RMCT_0513 | RMCT_3156 | RMCT_0513 | RMCT_3156 | Transcriptional regulator. | Transcriptional regulator. | 0.688 |
RMCT_0513 | YybR | RMCT_0513 | RMCT_1981 | Transcriptional regulator. | HxlR family transcriptional regulator. | 0.735 |
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