Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0540Esat-6 like protein esxU; Belongs to the WXG100 family. (106 aa)    
Predicted Functional Partners:
RMCT_0541
Esat-6 like protein esxT; Belongs to the WXG100 family.
  
 
 0.996
EccCa1_3
Cell division FtsK/SpoIIIE.
  
 
 0.891
EsxA
6 kDa early secretory antigenic target esxA, Esat-6; Belongs to the WXG100 family.
  
 
 0.878
RMCT_4067
PE family protein.
   
 
 0.796
EccCa1_2
Cell division protein FtsK.
  
 
 0.792
RMCT_0539
Putative uncharacterized protein.
     
 0.726
SpoIIIE
Cell division transmembrane protein ftsK.
  
 
 0.675
RMCT_0537
Putative uncharacterized protein.
  
  
 0.559
RMCT_0536
Peptidase S8/S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family.
  
  
 0.554
EspA_1
Uncharacterized protein.
  
 
 0.512
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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