STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0541Esat-6 like protein esxT; Belongs to the WXG100 family. (95 aa)    
Predicted Functional Partners:
RMCT_0540
Esat-6 like protein esxU; Belongs to the WXG100 family.
  
 
 0.998
EsxB
WXG repeat protein; Belongs to the WXG100 family.
  
 
 0.949
EccCa1_3
Cell division FtsK/SpoIIIE.
 
 
 0.777
RMCT_4067
PE family protein.
   
 
 0.762
SpoIIIE
Cell division transmembrane protein ftsK.
  
 
 0.740
RMCT_0539
Putative uncharacterized protein.
     
 0.712
EccCa1_2
Cell division protein FtsK.
 
 
 0.672
EccB1_1
Type VII secretion protein EccB, Actinobacterial.
 
 
 0.671
RMCT_0740
Alanine rich transmembrane protein.
  
     0.660
EccB1_3
Putative uncharacterized protein.
 
 
 0.653
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.