Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Alr | GadA | RMCT_0559 | RMCT_0558 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Glutamate decarboxylase gadB; Belongs to the group II decarboxylase family. | 0.616 |
| Alr | YdiB | RMCT_0559 | RMCT_0561 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | ATPase, YjeE family. | 0.989 |
| Alr | nnrD | RMCT_0559 | RMCT_0557 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | 0.815 |
| GadA | Alr | RMCT_0558 | RMCT_0559 | Glutamate decarboxylase gadB; Belongs to the group II decarboxylase family. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.616 |
| GadA | RhlE_1 | RMCT_0558 | RMCT_0534 | Glutamate decarboxylase gadB; Belongs to the group II decarboxylase family. | ATP-dependent RNA helicase. | 0.561 |
| GadA | RhlE_2 | RMCT_0558 | RMCT_2342 | Glutamate decarboxylase gadB; Belongs to the group II decarboxylase family. | ATP-dependent RNA helicase rhlE; Belongs to the DEAD box helicase family. | 0.561 |
| GadA | YdiB | RMCT_0558 | RMCT_0561 | Glutamate decarboxylase gadB; Belongs to the group II decarboxylase family. | ATPase, YjeE family. | 0.597 |
| GadA | deaD | RMCT_0558 | RMCT_1995 | Glutamate decarboxylase gadB; Belongs to the group II decarboxylase family. | Cold-shock deaD-box protein A deaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.561 |
| GadA | nnrD | RMCT_0558 | RMCT_0557 | Glutamate decarboxylase gadB; Belongs to the group II decarboxylase family. | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | 0.900 |
| NudF_1 | RhlE_1 | RMCT_2118 | RMCT_0534 | NTP pyrophosphohydrolase. | ATP-dependent RNA helicase. | 0.737 |
| NudF_1 | RhlE_2 | RMCT_2118 | RMCT_2342 | NTP pyrophosphohydrolase. | ATP-dependent RNA helicase rhlE; Belongs to the DEAD box helicase family. | 0.737 |
| NudF_1 | deaD | RMCT_2118 | RMCT_1995 | NTP pyrophosphohydrolase. | Cold-shock deaD-box protein A deaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.737 |
| NudF_1 | nnrD | RMCT_2118 | RMCT_0557 | NTP pyrophosphohydrolase. | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | 0.924 |
| NudF_2 | RhlE_1 | RMCT_4557 | RMCT_0534 | NUDIX hydrolase. | ATP-dependent RNA helicase. | 0.737 |
| NudF_2 | RhlE_2 | RMCT_4557 | RMCT_2342 | NUDIX hydrolase. | ATP-dependent RNA helicase rhlE; Belongs to the DEAD box helicase family. | 0.737 |
| NudF_2 | deaD | RMCT_4557 | RMCT_1995 | NUDIX hydrolase. | Cold-shock deaD-box protein A deaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.737 |
| NudF_2 | nnrD | RMCT_4557 | RMCT_0557 | NUDIX hydrolase. | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | 0.931 |
| NudG | RhlE_1 | RMCT_3070 | RMCT_0534 | Mutator protein mutT; Belongs to the Nudix hydrolase family. | ATP-dependent RNA helicase. | 0.737 |
| NudG | RhlE_2 | RMCT_3070 | RMCT_2342 | Mutator protein mutT; Belongs to the Nudix hydrolase family. | ATP-dependent RNA helicase rhlE; Belongs to the DEAD box helicase family. | 0.737 |
| NudG | deaD | RMCT_3070 | RMCT_1995 | Mutator protein mutT; Belongs to the Nudix hydrolase family. | Cold-shock deaD-box protein A deaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.737 |
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