Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0579Hypothetical protein. (135 aa)    
Predicted Functional Partners:
RMCT_3894
Gp101; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.746
RMCT_2319
Hypothetical protein.
  
     0.727
RMCT_0741
35 kDa alanine rich protein.
  
     0.713
RMCT_3901
Acetyltransferase.
  
     0.709
guaB
Inosine-5-monophosphate dehydrogenase guaB2; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
       0.668
RMCT_4284
Putative uncharacterized protein.
  
     0.651
RMCT_0581
Inosine-5-monophosphate dehydrogenase guaB3.
       0.647
RMCT_3637
Protein of unknown function.
  
     0.640
RMCT_0899
Protein of unknown function.
  
     0.589
RMCT_2203
Lipoprotein lprD.
  
     0.586
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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