Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0625Alpha/beta hydrolase fold protein. (280 aa)    
Predicted Functional Partners:
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.686
YhjD
Ribonuclease.
     
 0.649
PpsA_2
Beta-ketoacyl synthase.
  
 0.587
RMCT_1907
MCE associated protein.
 
 0.581
Pks2
Polyketide synthase pks5.
  
 0.580
ExoA
Exodeoxyribonuclease III Xth.
       0.579
RMCT_2071
Putative uncharacterized protein.
 
 0.571
RMCT_1887
Short-chain dehydrogenase/reductase SDR.
 
 0.558
RMCT_2088
Hypothetical protein.
  
 
 0.548
PlsB
Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
 
  
 0.540
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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