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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0635Transposase. (207 aa)    
Predicted Functional Partners:
RMCT_0381
Hypothetical protein.
  
    0.501
RMCT_0704
Peptidoglycan-binding LysM.
 
     0.501
SdhA_2
Succinate dehydrogenase flavoprotein subunit.
  
    0.492
RMCT_0740
Alanine rich transmembrane protein.
  
     0.492
SdhB
Succinate dehydrogenase iron-sulfur subunit.
       0.489
RMCT_1102
Hypothetical protein.
  
    0.484
RMCT_0379
Hypothetical protein.
  
    0.482
RMCT_0639
Succinate dehydrogenase.
  
    0.470
RMCT_0638
Succinate dehydrogenase.
       0.469
RMCT_2079
Alkyl hydroperoxide reductase C protein ahpC.
  
  
 0.466
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.