STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0648Hypothetical protein. (212 aa)    
Predicted Functional Partners:
RMCT_4221
Putative uncharacterized protein.
 
  
 0.955
RMCT_0647
Putative uncharacterized protein.
 
  
 0.709
RMCT_1329
Zn-dependent protease; Belongs to the peptidase M50B family.
 
  
 0.644
HspX_2
Heat shock protein hspX; Belongs to the small heat shock protein (HSP20) family.
 
  
 0.623
RMCT_0795
Hypothetical protein.
 
  
 0.619
HspX_1
Hsp20/alpha crystallin family protein; Belongs to the small heat shock protein (HSP20) family.
 
  
 0.580
RMCT_1708
Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family.
 
  
 0.573
RMCT_1451
Trehalose-phosphatase.
 
    0.495
PfkB_2
Ribokinase-like domain-containing protein.
  
  
 0.476
PfkB_1
6-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.476
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.