Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0694Ribonuclease BN. (318 aa)    
Predicted Functional Partners:
RMCT_1769
Transmembrane protein.
 
  
 0.585
RMCT_2837
RNA polymerase sigma-70 factor.
 
    0.578
RMCT_0693
Putative uncharacterized protein.
       0.532
RMCT_4341
Putative uncharacterized protein.
 
   
 0.513
BetC
Hydrolase.
  
  
 0.482
PtpA_1
Phosphotyrosine protein phosphatase ptpA; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.473
ArsC_1
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.473
RMCT_1504
CsbD family protein; Belongs to the UPF0337 (CsbD) family.
  
    0.445
CinA
Competence damage-inducible protein A; Belongs to the CinA family.
 
    0.431
RMCT_1624
Gluconolactonase.
   
  
 0.425
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.