HrdB protein (Mycolicibacterium thermoresistibile)

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HrdB

RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (319 aa)

Predicted Functional Partners:

rpoB

0.973

rpoA

0.960

rpoC

0.955

rbpA

0.905

rpoZ

0.895

RMCT_3339

0.886

HelD

0.809

MprA

0.801

RMCT_4559

0.795

whiA

0.790

Your Current Organism:

Mycolicibacterium thermoresistibile

NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HelD	HrdB	RMCT_1348	RMCT_0697	Helicase.	RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.809
HelD	rbpA	RMCT_1348	RMCT_0189	Helicase.	Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	0.818
HelD	rpoA	RMCT_1348	RMCT_0527	Helicase.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.825
HelD	rpoB	RMCT_1348	RMCT_2930	Helicase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.906
HelD	rpoC	RMCT_1348	RMCT_2929	Helicase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.901
HelD	rpoZ	RMCT_1348	RMCT_3654	Helicase.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.858
HrdB	HelD	RMCT_0697	RMCT_1348	RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Helicase.	0.809
HrdB	MprA	RMCT_0697	RMCT_1582	RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Two component response transcriptional regulatory protein MprA.	0.801
HrdB	RMCT_3339	RMCT_0697	RMCT_3339	RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Transcription factor.	0.886
HrdB	RMCT_4559	RMCT_0697	RMCT_4559	RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Stage II sporulation protein E.	0.795
HrdB	rbpA	RMCT_0697	RMCT_0189	RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	0.905
HrdB	rpoA	RMCT_0697	RMCT_0527	RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.960
HrdB	rpoB	RMCT_0697	RMCT_2930	RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.973
HrdB	rpoC	RMCT_0697	RMCT_2929	RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.955
HrdB	rpoZ	RMCT_0697	RMCT_3654	RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.895
HrdB	whiA	RMCT_0697	RMCT_3632	RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Transcriptional regulatory protein whiA; Involved in cell division and chromosome segregation.	0.790
MprA	HrdB	RMCT_1582	RMCT_0697	Two component response transcriptional regulatory protein MprA.	RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.801
MprA	RMCT_4559	RMCT_1582	RMCT_4559	Two component response transcriptional regulatory protein MprA.	Stage II sporulation protein E.	0.899
MprA	rpoA	RMCT_1582	RMCT_0527	Two component response transcriptional regulatory protein MprA.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.819
MprA	rpoB	RMCT_1582	RMCT_2930	Two component response transcriptional regulatory protein MprA.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.831

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