STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PhzFPhenazine biosynthesis protein PhzF family. (228 aa)    
Predicted Functional Partners:
RMCT_0701
ATP-grasp superfamily enzyme.
       0.629
SthA
Soluble pyridine nucleotide transhydrogenase.
     
 0.469
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
  
  
 0.461
TrpG
Para-aminobenzoate synthase component II.
  
  
 0.459
RMCT_4600
Glycosyl transferase, UDP-glucuronosyltransferase.
 
    0.454
RMCT_0200
Zn-dependent hydrolase.
 
    0.452
RMCT_1204
UDP-glucuronosyltransferase.
 
    0.441
RMCT_4597
Glycosyl transferase, UDP-glucuronosyltransferase.
 
    0.438
RMCT_1203
Glycosyl transferase, UDP-glucuronosyltransferase.
 
    0.428
RMCT_4383
Glycosyltransferase.
 
    0.409
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.