STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GmhA1Phosphoheptose isomerase. (233 aa)    
Predicted Functional Partners:
RMCT_0731
Sedoheptulose 7-phosphate isomerase.
 
     0.911
GmhA
Phosphoheptose isomerase.
  
  
 
0.902
HypE_2
Hydrogenase expression/formation protein HypE.
     
 0.806
HypC_2
Hydrogenase maturation protein HypC.
 
     0.774
HypD_2
Hydrogenase expression/formation protein HypD.
     
 0.740
RMCT_1077
Phosphoheptose isomerase.
 
     0.613
RMCT_0729
Hydrogenase assembly chaperone HypC/HupF.
 
     0.589
RMCT_0728
Hydrogenase maturation protease.
 
   
 0.582
RMCT_0722
Hydrogen:quinone oxidoreductase.
 
   
 0.573
RMCT_0726
Putative uncharacterized protein.
 
   
 0.566
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.