Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_074135 kDa alanine rich protein. (281 aa)    
Predicted Functional Partners:
RMCT_0740
Alanine rich transmembrane protein.
  
  
 0.909
RMCT_0899
Protein of unknown function.
 
  
 0.824
RMCT_0742
XRE family transcriptional regulator.
  
  
 0.815
RMCT_3894
Gp101; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.773
HrdB
RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.771
RMCT_1677
Chorismate mutase.
  
     0.771
RMCT_0828
Putative uncharacterized protein.
  
     0.764
RMCT_3314
Protein of unknown function.
  
     0.757
RMCT_2203
Lipoprotein lprD.
  
     0.748
RMCT_3430
Hypothetical protein.
  
     0.746
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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