Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CorC | FolP1 | RMCT_0762 | RMCT_3311 | Transmembrane protein. | Dihydropteroate synthase 1 folp. | 0.694 |
CorC | MmpL8_4 | RMCT_0762 | RMCT_0765 | Transmembrane protein. | Transmembrane transport protein MmpL. | 0.617 |
CorC | RMCT_0761 | RMCT_0762 | RMCT_0761 | Transmembrane protein. | Cytidine deaminase. | 0.976 |
CorC | RMCT_0766 | RMCT_0762 | RMCT_0766 | Transmembrane protein. | Membrane protein mmpS4. | 0.601 |
CorC | RsmE | RMCT_0762 | RMCT_0767 | Transmembrane protein. | 16S ribosomal RNA methyltransferase RsmE; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.539 |
CorC | YbeZ_1 | RMCT_0762 | RMCT_0764 | Transmembrane protein. | phoH-like protein phoH1. | 0.940 |
CorC | YtfL | RMCT_0762 | RMCT_0368 | Transmembrane protein. | CBS domain-containing protein. | 0.602 |
CorC | dnaJ | RMCT_0762 | RMCT_0768 | Transmembrane protein. | Chaperone dnaJ2; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.662 |
CorC | era | RMCT_0762 | RMCT_0760 | Transmembrane protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.974 |
CorC | ybeY | RMCT_0762 | RMCT_0763 | Transmembrane protein. | Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.980 |
FolP1 | CorC | RMCT_3311 | RMCT_0762 | Dihydropteroate synthase 1 folp. | Transmembrane protein. | 0.694 |
FolP1 | RMCT_0761 | RMCT_3311 | RMCT_0761 | Dihydropteroate synthase 1 folp. | Cytidine deaminase. | 0.636 |
FolP1 | era | RMCT_3311 | RMCT_0760 | Dihydropteroate synthase 1 folp. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.404 |
MmpL8_4 | CorC | RMCT_0765 | RMCT_0762 | Transmembrane transport protein MmpL. | Transmembrane protein. | 0.617 |
MmpL8_4 | RMCT_0761 | RMCT_0765 | RMCT_0761 | Transmembrane transport protein MmpL. | Cytidine deaminase. | 0.601 |
MmpL8_4 | RMCT_0766 | RMCT_0765 | RMCT_0766 | Transmembrane transport protein MmpL. | Membrane protein mmpS4. | 0.789 |
MmpL8_4 | RsmE | RMCT_0765 | RMCT_0767 | Transmembrane transport protein MmpL. | 16S ribosomal RNA methyltransferase RsmE; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.551 |
MmpL8_4 | YbeZ_1 | RMCT_0765 | RMCT_0764 | Transmembrane transport protein MmpL. | phoH-like protein phoH1. | 0.773 |
MmpL8_4 | dnaJ | RMCT_0765 | RMCT_0768 | Transmembrane transport protein MmpL. | Chaperone dnaJ2; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.443 |
MmpL8_4 | era | RMCT_0765 | RMCT_0760 | Transmembrane transport protein MmpL. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.626 |
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