Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BaeB_3 | rplK | RMCT_1352 | RMCT_2951 | Beta-lactamase domain-containing protein. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.492 |
| BaeB_3 | rplQ | RMCT_1352 | RMCT_0528 | Beta-lactamase domain-containing protein. | 50S ribosomal protein L17. | 0.499 |
| BaeB_3 | rplU | RMCT_1352 | RMCT_0825 | Beta-lactamase domain-containing protein. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.500 |
| BaeB_3 | rpsQ | RMCT_1352 | RMCT_0448 | Beta-lactamase domain-containing protein. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.907 |
| BaeB_3 | sodB | RMCT_1352 | RMCT_3486 | Beta-lactamase domain-containing protein. | Superoxide dismutase Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.772 |
| BaeB_3 | ybeY | RMCT_1352 | RMCT_0763 | Beta-lactamase domain-containing protein. | Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.921 |
| CorC | RMCT_0761 | RMCT_0762 | RMCT_0761 | Transmembrane protein. | Cytidine deaminase. | 0.976 |
| CorC | YbeZ_1 | RMCT_0762 | RMCT_0764 | Transmembrane protein. | phoH-like protein phoH1. | 0.940 |
| CorC | era | RMCT_0762 | RMCT_0760 | Transmembrane protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.974 |
| CorC | ybeY | RMCT_0762 | RMCT_0763 | Transmembrane protein. | Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.980 |
| RMCT_0761 | CorC | RMCT_0761 | RMCT_0762 | Cytidine deaminase. | Transmembrane protein. | 0.976 |
| RMCT_0761 | YbeZ_1 | RMCT_0761 | RMCT_0764 | Cytidine deaminase. | phoH-like protein phoH1. | 0.874 |
| RMCT_0761 | era | RMCT_0761 | RMCT_0760 | Cytidine deaminase. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.969 |
| RMCT_0761 | ybeY | RMCT_0761 | RMCT_0763 | Cytidine deaminase. | Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.966 |
| YbeZ_1 | CorC | RMCT_0764 | RMCT_0762 | phoH-like protein phoH1. | Transmembrane protein. | 0.940 |
| YbeZ_1 | RMCT_0761 | RMCT_0764 | RMCT_0761 | phoH-like protein phoH1. | Cytidine deaminase. | 0.874 |
| YbeZ_1 | era | RMCT_0764 | RMCT_0760 | phoH-like protein phoH1. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.905 |
| YbeZ_1 | ybeY | RMCT_0764 | RMCT_0763 | phoH-like protein phoH1. | Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.973 |
| era | CorC | RMCT_0760 | RMCT_0762 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Transmembrane protein. | 0.974 |
| era | RMCT_0761 | RMCT_0760 | RMCT_0761 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Cytidine deaminase. | 0.969 |
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