Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DhbE_1 | DhbF | RMCT_0779 | RMCT_0774 | Bifunctional enzyme mbtA: salicyl-AMP ligase + salicyl-S-arcp synthetase. | Peptide synthetase mbtE. | 0.864 |
DhbE_1 | EryA_1 | RMCT_0779 | RMCT_0775 | Bifunctional enzyme mbtA: salicyl-AMP ligase + salicyl-S-arcp synthetase. | Acyl transferase domain-containing protein. | 0.881 |
DhbE_1 | EryA_2 | RMCT_0779 | RMCT_0776 | Bifunctional enzyme mbtA: salicyl-AMP ligase + salicyl-S-arcp synthetase. | Polyketide synthetase mbtC; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.969 |
DhbE_1 | LgrD_1 | RMCT_0779 | RMCT_0773 | Bifunctional enzyme mbtA: salicyl-AMP ligase + salicyl-S-arcp synthetase. | Peptide synthetase mbtF. | 0.856 |
DhbE_1 | MbtB_1 | RMCT_0779 | RMCT_0777 | Bifunctional enzyme mbtA: salicyl-AMP ligase + salicyl-S-arcp synthetase. | Phenyloxazoline synthase mbtB. | 0.933 |
DhbE_1 | MbtB_2 | RMCT_0779 | RMCT_0778 | Bifunctional enzyme mbtA: salicyl-AMP ligase + salicyl-S-arcp synthetase. | Phenyloxazoline synthase mbtB. | 0.997 |
DhbE_1 | MbtH_1 | RMCT_0779 | RMCT_0771 | Bifunctional enzyme mbtA: salicyl-AMP ligase + salicyl-S-arcp synthetase. | Protein mbtH. | 0.960 |
DhbE_1 | RMCT_0770 | RMCT_0779 | RMCT_0770 | Bifunctional enzyme mbtA: salicyl-AMP ligase + salicyl-S-arcp synthetase. | Mitomycin antibiotics/polyketide fumonisin biosynthesis protein. | 0.473 |
DhbE_1 | RMCT_0772 | RMCT_0779 | RMCT_0772 | Bifunctional enzyme mbtA: salicyl-AMP ligase + salicyl-S-arcp synthetase. | lysine-N-oxygenase mbtG. | 0.947 |
DhbF | DhbE_1 | RMCT_0774 | RMCT_0779 | Peptide synthetase mbtE. | Bifunctional enzyme mbtA: salicyl-AMP ligase + salicyl-S-arcp synthetase. | 0.864 |
DhbF | EryA_1 | RMCT_0774 | RMCT_0775 | Peptide synthetase mbtE. | Acyl transferase domain-containing protein. | 0.994 |
DhbF | EryA_2 | RMCT_0774 | RMCT_0776 | Peptide synthetase mbtE. | Polyketide synthetase mbtC; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.996 |
DhbF | LgrD_1 | RMCT_0774 | RMCT_0773 | Peptide synthetase mbtE. | Peptide synthetase mbtF. | 0.878 |
DhbF | MbtB_1 | RMCT_0774 | RMCT_0777 | Peptide synthetase mbtE. | Phenyloxazoline synthase mbtB. | 0.985 |
DhbF | MbtB_2 | RMCT_0774 | RMCT_0778 | Peptide synthetase mbtE. | Phenyloxazoline synthase mbtB. | 0.954 |
DhbF | MbtH_1 | RMCT_0774 | RMCT_0771 | Peptide synthetase mbtE. | Protein mbtH. | 0.993 |
DhbF | RMCT_0770 | RMCT_0774 | RMCT_0770 | Peptide synthetase mbtE. | Mitomycin antibiotics/polyketide fumonisin biosynthesis protein. | 0.661 |
DhbF | RMCT_0772 | RMCT_0774 | RMCT_0772 | Peptide synthetase mbtE. | lysine-N-oxygenase mbtG. | 0.937 |
EryA_1 | DhbE_1 | RMCT_0775 | RMCT_0779 | Acyl transferase domain-containing protein. | Bifunctional enzyme mbtA: salicyl-AMP ligase + salicyl-S-arcp synthetase. | 0.881 |
EryA_1 | DhbF | RMCT_0775 | RMCT_0774 | Acyl transferase domain-containing protein. | Peptide synthetase mbtE. | 0.994 |
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