STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0791Glycoside hydrolase 15-like protein. (682 aa)    
Predicted Functional Partners:
TreS
Trehalose synthase treS.
 
  
 0.975
OtsB
Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
  
 0.968
TreZ
Maltooligosyltrehalose trehalohydrolase treZ.
  
 
 0.961
RMCT_1451
Trehalose-phosphatase.
  
  
 0.937
OtsA
Alpha,alpha-trehalose-phosphate synthase.
 
   
 0.854
PpsA_7
Polyketide synthase pks13.
    
  0.810
FbpC_3
Esterase.
    
  0.802
FbpC_2
Esterase.
    
  0.802
FbpC_4
Esterase.
    
  0.802
FbpB
Antigen 85-C.
    
  0.802
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.