STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0794Amidohydrolase. (285 aa)    
Predicted Functional Partners:
CysK1
Cysteine synthase A cysK1; Belongs to the cysteine synthase/cystathionine beta- synthase family.
       0.560
CysE
Serine O-acetyltransferase.
       0.541
RMCT_0279
Type I phosphodiesterase/nucleotide pyrophosphatase.
  
  
  0.495
BetC
Hydrolase.
  
 
 0.491
RMCT_4061
Prolyl oligopeptidase family protein.
       0.482
RMCT_1767
Cyclase/dehydrase.
  
     0.479
RMCT_2725
Lipoprotein aminopeptidase lpqL.
  
 
  0.460
AtsA
Arylsulfatase atsA.
  
 
  0.448
AtsA_1
Arylsulfatase AtsA.
  
 
  0.448
RMCT_1441
Sulfatase family protein.
  
 
  0.448
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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