Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0798PemK-like protein. (203 aa)    
Predicted Functional Partners:
RMCT_4559
Stage II sporulation protein E.
 
  
 0.626
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
     
 0.621
RMCT_4541
Predicted transcriptional regulator.
  
    0.571
YybR
HxlR family transcriptional regulator.
   
    0.554
GlcA
Glycoside hydrolase family protein.
  
    0.519
RMCT_4294
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
     0.467
RMCT_4469
Hypothetical protein.
   
    0.428
RMCT_1307
Periplasmic binding protein.
  
  
 0.427
RMCT_0796
Putative uncharacterized protein.
       0.419
RMCT_1308
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
     
 0.413
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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