STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0831Saccharopine dehydrogenase. (418 aa)    
Predicted Functional Partners:
InhA
Enoyl-(acyl carrier protein) reductase.
     
 0.829
PtpA_2
Peptidase S9 prolyl oligopeptidase.
       0.774
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.768
Fgs
Folylpolyglutamate synthase protein folC.
       0.717
EryA_2
Polyketide synthetase mbtC; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
      
 0.612
RMCT_0828
Putative uncharacterized protein.
       0.554
DesA3
linoleoyl-CoA desaturase.
 
    0.527
Tgs2_1
Diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family.
 
     0.485
RebM_2
Type 11 methyltransferase.
  
  
 0.485
RMCT_4596
Methylase.
  
  
 0.485
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.