Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NeiDNA glycosylase; Belongs to the FPG family. (268 aa)    
Predicted Functional Partners:
MutM_1
Endonuclease VIII; Belongs to the FPG family.
  
  
 
0.926
RpiB
Ribose-5-phosphate isomerase B.
       0.868
RMCT_0847
DsbA oxidoreductase.
 
   
 0.718
dnaQ-2
DNA polymerase III subunit epsilon.
  
  
 0.701
RMCT_3456
ATP-dependent helicase.
  
  
 0.655
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.641
RMCT_0846
AMP-forming long-chain acyl-CoA synthetase.
       0.615
RecQ_1
ATP-dependent DNA helicase.
  
  
 0.602
PepN
Aminopeptidase N pepN.
       0.574
coaE
dephospho-CoA kinase coaE; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
  
 0.520
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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