STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Frc_8L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (390 aa)    
Predicted Functional Partners:
Frc_9
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
    
0.885
Frc_1
Formyl-coenzyme A transferase; Belongs to the CoA-transferase III family.
  
     0.773
Frc_7
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
 
     0.770
FabG_14
Glucose 1-dehydrogenase.
   
   0.628
RMCT_0852
Lipid-transfer protein.
  
  
 0.627
RMCT_0851
Putative uncharacterized protein.
       0.600
OphA1_2
Phthalate 4,5-dioxygenase reductase subunit.
  
  
 0.585
KasA_2
Fatty acid synthase.
  
 0.575
YngG_2
hydroxymethylglutaryl-CoA lyase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
  0.529
Oxc
Thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family.
  
 
 0.523
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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