STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LimB_3Limonene monooxygenase. (401 aa)    
Predicted Functional Partners:
LimA
Epoxide hydrolase.
     
 0.926
LimB_7
Limonene 1,2-monooxygenase.
  
  
 
0.907
RMCT_0871
Putative hydrolase or acyltransferase of alpha/b eta superfamily protein.
  
  
 0.802
RMCT_0870
Putative uncharacterized protein.
       0.690
RutA_4
Pyrimidine utilization protein A.
 
     0.648
ribA
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
     
 0.628
YesE_2
Putative uncharacterized protein.
       0.582
SsuB_2
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
  
 0.500
Azo1
NADPH-dependent FMN reductase.
  
 
 0.495
Azr
NADPH-dependent FMN reductase.
  
 
 0.495
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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