Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RutA_4Pyrimidine utilization protein A. (355 aa)    
Predicted Functional Partners:
pyrR
Pyrimidine operon regulatory protein pyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
    
  0.905
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
    
  0.901
DeoA
Thymidine phosphorylase.
     
  0.900
NtaA
Monooxygenase.
 
  
 0.798
ribA
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
    0.785
YesE_2
Putative uncharacterized protein.
       0.773
RMCT_4166
Oxidoreductase.
 
    0.735
LuxA_2
F420-dependent oxidoreductase.
  
     0.719
RMCT_1337
Luciferase-like protein.
  
     0.700
CaiA_1
acyl-CoA dehydrogenase.
 
    0.698
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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