STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CpnA_4Short-chain alcohol dehydrogenase-like protein. (255 aa)    
Predicted Functional Partners:
KasA_2
Fatty acid synthase.
  
 0.782
RMCT_0880
Putative uncharacterized protein.
       0.773
FabG_9
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.709
RMCT_1887
Short-chain dehydrogenase/reductase SDR.
  
     0.659
CpnA_3
Short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.657
FabG_28
Short chain dehydrogenase.
 
    0.656
EchA8_18
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.651
FadE17_2
acyl-CoA dehydrogenase.
 
 0.606
YnaI
Small-conductance mechanosensitive channel.
  
 0.596
glsA
Glutaminase; Belongs to the glutaminase family.
  
 0.593
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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