Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GlbOHemoglobin-like oxygen-binding protein glbO. (142 aa)    
Predicted Functional Partners:
MalL
Alpha-glucosidase aglA.
      0.909
RMCT_0901
HNH endonuclease.
       0.602
RMCT_0847
DsbA oxidoreductase.
  
  
 0.590
CcsB
Cytochrome c assembly protein.
 
   
 0.515
RMCT_0900
Putative uncharacterized protein.
       0.497
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.472
RMCT_0899
Protein of unknown function.
       0.459
SseA_1
Thiosulfate sulfurtransferase.
  
    0.450
RMCT_2356
Glutaredoxin protein.
  
  
 0.426
RMCT_0358
Thioesterase superfamily protein.
   
    0.415
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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