Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YebZCopper resistance D. (671 aa)    
Predicted Functional Partners:
YcnJ
Copper resistance protein CopC.
 
  
 0.857
QcrC
Ubiquinol-cytochrome C reductase qcrC.
 
  
 0.785
PlsB
Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
       0.776
PlsC_2
1-acyl-sn-glycerol-3-phosphate acyltransferase; Bifunctionnal transmembrane phospholipid biosynthesis enzyme plsC: L-3-phosphoserine phosphatase + 1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.776
CtaA
Antibiotic ABC transporter membrane protein.
 
   
 0.726
RMCT_2598
Transmembrane protein.
 
    0.715
QcrB
Ubiquinol-cytochrome c reductase cytochrome b subunit.
 
  
 0.662
Tgs4_1
Diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family.
       0.658
RMCT_3877
Rieske iron-sulfur protein qcrA.
 
  
 0.657
CtaC
Transmembrane cytochrome C oxidase subunit II ctaC.
 
  
 0.653
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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