STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CitECitrate lyase beta subunit citE; Belongs to the HpcH/HpaI aldolase family. (272 aa)    
Predicted Functional Partners:
RMCT_0921
Oxidase regulatory-like protein.
 
  
 0.990
RMCT_0922
acyl-CoA dehydrogenase fadE19.
 
  
 0.989
RMCT_0924
acetyl-/propionyl-CoA carboxylase beta subunit accD1.
  
  
 0.975
Mcl1
Citrate (pro-3S)-lyase subunit beta; Belongs to the HpcH/HpaI aldolase family.
 
  
 
0.932
AccA1_2
Acetyl-/propionyl-coenzyme A carboxylase subunit alpha.
 
  
 0.925
KstR2_10
TetR family transcriptional regulator.
 
   
 0.825
egtD
S-adenosyl-L-methionine- dependentmethyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
      
 0.821
BkdB
Branched-chain alpha-keto acid dehydrogenase subunit E2.
  
  
 0.809
PdhA
Pyruvate dehydrogenase E1 component alpha subunit pdhA.
     
 0.780
PdhB
Pyruvate dehydrogenase E1 component beta subunit pdhB.
     
 0.772
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.