STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0934ErfK/YbiS/YcfS/YnhG family protein. (406 aa)    
Predicted Functional Partners:
Pon1
Bifunctional membrane-associated penicillin-binding protein 1A/1B ponA2 : penicillin-insensitive transglycosylase + penicillin-sensitive transpeptidase.
 
  
 0.706
crgA
Septation inhibitor protein; Involved in cell division; Belongs to the CrgA family.
  
   
 0.695
DacB_4
D-alanyl-D-alanine carboxypeptidase.
 
  
 0.654
RMCT_3572
Methionine synthase, vitamin-B12 independent.
 
   
 0.604
PbpA_1
Penicillin-binding protein pbpA.
     
 0.556
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
     
 0.509
RMCT_0342
Integral membrane protein.
     
 0.502
RMCT_3492
Abortive infection protein.
     
 0.502
LytC
Hydrolase.
 
   
 0.496
RMCT_0099
Anion-transporting ATPase.
 
     0.474
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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