Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Bcp_2Bacterioferritin comigratory protein bcp. (157 aa)    
Predicted Functional Partners:
RMCT_0937
Hypothetical protein.
       0.727
Tmk
Thymidylate kinase.
 
 
   0.665
RMCT_2079
Alkyl hydroperoxide reductase C protein ahpC.
 
 
 0.657
TrxC
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.634
Mrp
ATP-binding Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
  
 0.559
RMCT_4327
3-Cys thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
 
 
0.548
RMCT_1771
Glutathione S-transferase.
  
  
 0.546
TrxA
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.526
YbbN
Thioredoxin.
  
 
 0.520
TrxB
Thioredoxin reductase.
 
  
 0.488
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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